Message | Vitae | Teaching |  Publications | Consulting | Outreach | Contact  

 

 

 

.

 

Using the R Software in a High Performance Computing Cluster

By Carlos García [cgarci8 AT tigers.lsu.edu]

PDF document 05/22/2014 2:00 PM [Next update: Dec 30, 2014]

Files of shell scripts

testmyr.sh

testmyrp.sh

Files of R scripts

testofr.R

testofrp.R

Useful websites

R Software

R project http://www.r-project.org/

BioconductoR http://www.bioconductor.org/

R phylo http://www.r-phylo.org/wiki/HowTo/Taskview

R software description from the LSU HPC: http://www.hpc.lsu.edu/docs/guides/software.php?software=R

CRAN Task View: Phylogenetics, Especially Comparative Methods http://cran.r-project.org/web/views/Phylogenetics.html

CRAN Task View: Statistical Genetics http://cran.r-project.org/web/views/Genetics.html

CRAN Task View: High-Performance and Parallel Computing with R http://cran.r-project.org/web/views/HighPerformanceComputing.html

LSU HPC

Main website: http://www.hpc.lsu.edu/

Philip: http://www.hpc.lsu.edu/docs/guides.php?system=Philip

Mike: http://www.hpc.lsu.edu/resources/hpc/system.php?system=SuperMike-II

Utilities

Notepad++ http://notepad-plus-plus.org/

Putty: http://www.chiark.greenend.org.uk/~sgtatham/putty/download.html

Nano editor http://www.nano-editor.org/

WinSCP: http://winscp.net/eng/index.php

GCC, the GNU Compiler Collection: https://gcc.gnu.org/

Linux

Linux cheat sheet     http://linoxide.com/linux-command/linux-commands-cheat-sheet/

Best Linux Cheat Sheets http://www.nixtutor.com/linux/all-the-best-linux-cheat-sheets/

 

Feel free to send comments, questions or suggestions <cgarci8 /AT/ tigers.lsu.edu >.

 Welcome Message  |  Vitae & Bio  |  Publications  |  Teaching Philosophy   |  Contact Information  u  |  Outreach & News  

© Www.CarlosIgnacio.Com | . Thu, 22 Jun 2017 18:47:27 -0500 .